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DNAdesign
Mutation Design
Interactive mutation design with DNA sequence and shape considerations
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Input a wildtype DNA Sequence (A, C, G, T):
Specify positions to introduce mutations:
Select a DNA shape parameter:
MGW
EP
Shear
Stretch
Stagger
Buckle
ProT
Opening
Shift
Slide
Rise
Tilt
Roll
HelT
▶
Open advanced settings
Specify shape focal positions (default: use all positions):
Metric for shape distance calculation:
Euclidean distance
Pearson's correlation
Normalize shape distance
Metric for base distance calculation:
Physical-chemical encoding distance
Levenshtein distance/Edit distance
Normalize base distance
Consider the RC strand as having 0 distance
Submit
Mutating in silico...